There are a growing number of great meditation apps, including Calm, Headspace, the Insight Timer. These days, Apple and Google also offer guided meditations in their fitness apps. The good news is that, in most cases, you can sync your meditation app to Count.It with little trouble.
Count.It does not connect directly to meditation-only apps, but most of these apps DO sync with the general trackers Count.It does support, i.e. Apple Health, Google Fit, or Fitbit. So, a user can connect their meditation app to either Apple Health or Google Fit, and Count.It will get the data automatically.
Here are some relevant links:
Calm syncs with Apple Health and Google Fit
Headspace syncs with Apple Health and Google Fit
Insight timer syncs with Apple Health
Unplug syncs with Apple Health